Elektrine
Log in Register
Paige Chat Timeline Gallery Friends Email Drive DNS Private DNS Domains VPN Kairo Nerve
Remote

PuckerLab

@PuckerLab@genomic.social
mastodon 4.7.3
  • Open on genomic.social

Plant Biotechnology and Bioinformatics at Uni Bonn https://www.pbb.uni-bonn.de

141 Followers
15 Following
11 Posts
Joined November 06, 2022
Plant Biotechnology and Bioinformatics:
https://www.pbb.uni-bonn.de
Open post
PuckerLab @PuckerLab@genomic.social
· 5mo ago

🌸 Exciting news: our Digitalis purpurea (foxglove) genome study got published! We uncovered the genetic basis of flower color and morphology - TEs are playing an important role.

🔗 https://doi.org/10.1186/s12864-026-12889-3

#Genomics #PlantScience #Anthocyanins #Evolution
@boas_pucker@mastodon.social
@samnm@mstdn.science

Genome sequence of the ornamental plant Digitalis purpurea reveals the molecular basis of flower color and morphology variation - BMC Genomics
SpringerLink

Genome sequence of the ornamental plant Digitalis purpurea reveals the molecular basis of flower color and morphology variation - BMC Genomics

Digitalis purpurea (foxglove) is a widely distributed ornamental plant. Here, we present a long read sequencing-based genome sequence of a magenta flowering D. purpurea plant and a corresponding prediction of gene models. The high assembly continuity is indicated by the N50 of 4.3 Mbp and the completeness is supported by discovery of about 96% complete BUSCO genes. This genomic resource paves the way for an in-depth investigation of the flower pigmentation of D. purpurea. Structural genes of the

6
0
3
0
Open post
PuckerLab @PuckerLab@genomic.social
· 6mo ago

One year at Uni Bonn after moving from TU Braunschweig — time really flies! A year full of exciting research, fresh ideas, and strong growth for our group. Grateful for amazing collaborators and supporters along the way. 🚀

On to an even more exciting year ahead!
https://www.pbb.uni-bonn.de

#ResearchLife #Science #Collaboration
@boas_pucker@mastodon.social
@samnm@mstdn.science

Plant Biotechnology and Bioinformatics (PuckerLab)
IZMB

Plant Biotechnology and Bioinformatics (PuckerLab)

4
0
2
0
Open post
PuckerLab @PuckerLab@genomic.social
· 5mo ago

We are pleased to join the TRA Modelling: Mathematics, Modelling and Simulation of Complex Systems. Looking forward to more transdisciplinary collaborations in the future!

https://www.izmb.uni-bonn.de/en/pbb/news

#Modelling #ComplexSystems #Simulation #Transdisciplinary #InterdisciplinaryResearch #UniversityOfBonn #Research #Collaboration #DataScience
@boas_pucker@mastodon.social

News
IZMB

News

2
0
3
0
Open post
PuckerLab @PuckerLab@genomic.social
· 7mo ago

Katharina is presenting her pigment engineering work at #GCSB2026. Check out P50 and read her recent review paper (https://doi.org/10.1111/plb.70047) to learn more
#SynBio #PlantBiotech #Yeast

Wiley Online Library

Error - Cookies Turned Off

3
0
3
0
Open post
PuckerLab @PuckerLab@genomic.social
· 5mo ago

Today, @boas_pucker@mastodon.social gave an insightful talk on scientific writing and academic publishing for our group (and interested students) at #UniBonn. Covered everything from how to structure a thesis and managing references with Zotero to how peer review actually works - especially useful for early-stage researchers. We will likely run it again this summer when more international guests are around. Interested students at UniBonn could reach out: https://www.pbb.uni-bonn.de

#ScientificWriting #Publishing

pbb.uni-bonn.de
2
0
1
0
Open post
PuckerLab @PuckerLab@genomic.social
· 6mo ago

Interested in the genetic secrets of your favorite plant?

A genome sequence might reveal them. We wrote down a workflow from DNA extraction & sequencing to genome sequence assembly & annotation. It includes a hands-on guide with example commands.

https://doi.org/10.1186/s12864-026-12623-z

#Genomics #Bioinformatics
@samnm@mstdn.science
@boas_pucker@mastodon.social

Cookbook for plant genome sequences - BMC Genomics
SpringerLink

Cookbook for plant genome sequences - BMC Genomics

Access to genome sequences is crucial to investigate and engineer traits in plants, explore biodiversity, and support phylogenetic studies. Over the last decade, affordable sequencing devices have substantially increased the size of the genomics community by enabling individual research groups to sequence the genomes of plant species of interest. There has also been a quick development of novel tools for sequencing data analysis. Here, we share experiences with plant long-read genomics methods f

2
2
2
0
Open post
PuckerLab @PuckerLab@genomic.social
· 6mo ago

🌱🐣 Happy Easter from our Plant Biotechnology & Bioinformatics Group! 🧬

Celebrating renewal, curiosity, and the hidden “Easter eggs” in biological data 🧪💻

🌿 Happy Easter! 🌼
https://www.izmb.uni-bonn.de/en/pbb
@boas_pucker@mastodon.social
@samnm@mstdn.science

Plant Biotechnology and Bioinformatics (PuckerLab)
IZMB

Plant Biotechnology and Bioinformatics (PuckerLab)

1
0
2
0
Open post
PuckerLab @PuckerLab@genomic.social
· 7mo ago

RE: https://mstdn.science/@samnm/116205368323560229

See what @samnm@mstdn.science achieved with our students within only 1.5 days 👇 #Bioinformatics #Genomics

Samuel Nestor Meckoni (@samnm@mstdn.science)
mstdn.science

Samuel Nestor Meckoni (@samnm@mstdn.science)

Attached: 1 image This week, I teach the students of WBIO-A-08 how to use the CLI. Currently they are having a lot of fun with piping 😈 They already learned how to create a @deNBI VM, transfer files, install tools via apt, and how to use a lot of small helpful utilities. In the next days some more bioinformatics orientated tools will follow. @PuckerLab@genomic.social #bioinformatics #linux

1
0
1
0
Open post
PuckerLab @PuckerLab@genomic.social
· 7mo ago

RE: https://mastodon.social/@boas_pucker/116129536732585877

We invite highly motivated and experienced students and early-career researchers to join our group in Bonn for a visiting research stay. This is a great opportunity to gain hands-on experience, exchange ideas, and work in a collaborative and supportive scientific environment with excellent computational resources.
#ComputationalBiology #Bioinformatics #EvolutionaryBiology #ComparativeGenomics #ResearchOpportunity #EarlyCareerResearchers
#PhDOpportunity #ScientificCollaboration #ResearchInGermany

Boas Pucker (@boas_pucker@mastodon.social)
Mastodon

Boas Pucker (@boas_pucker@mastodon.social)

Attached: 1 image Are you passionate about computational biology and the evolution of specialized plant metabolism? We invite highly motivated and experienced students and early-career researchers to join @PuckerLab@genomic.social in Bonn for a visiting research stay. This is a great opportunity to gain hands-on experience, exchange ideas, and work in a collaborative and supportive scientific environment with excellent computational resources. More details and contact information: https://ww

1
0
2
0
Open post
PuckerLab @PuckerLab@genomic.social
· 6mo ago

@deepdna_ai@mastodon.social Thanks for your comments. Why would you even try to sequence a polyploid genome with short-reads? It should be obvious that long-reads are superior. There is already a comparison by Marks et al., 2021 looking at different assembly metrics.

0
1
0
0
Open post
PuckerLab @PuckerLab@genomic.social
· 6mo ago
Replying to
@boas_pucker@mastodon.social @samnm@mstdn.science @deNBI@mstdn.science @denbioffice@bird.makeup
0
0
0
0
Back
313k7r1n3
Elektrine

Tor hidden service

elekhj7afj4qnrr4yd3bkzslsyo5jgfxw3orgjkhlcxifueodybyiiad.onion

I2P eepsite

j6b6cyk6gjmepjih7jjadxgxvvf3lzzujljuu2v4biemzpg3naya.b32.i2p

Platform

  • Email
  • Chat
  • Timeline
  • VPN
  • DNS

Company

  • About
  • Pricing
  • Contact
  • FAQ
  • Lite (no JS)

Legal

  • Terms of Service
  • Privacy Policy
  • Transparency Report
  • Report Abuse
  • Warrant Canary
  • VPN Policy

Support

  • support@elektrine.com
  • Report Security Issue
Mail client setup IMAP mail.elektrine.com:993 POP3 mail.elektrine.com:995 SMTP mail.elektrine.com:465
© 2026 Elektrine. All rights reserved. Server: 05:32:33 UTC